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©2017 BY GENOME INTELLIGENCE LAB @ ARRTI. PROUDLY CREATED WITH WIX.COM

PUBLICATIONS

Angeliki Pantazi

Cancer Genome Atlas Research Network. Integrated genomic and molecular
characterization of cervical cancer. Nature. 2017 Jan 23. doi:
10.1038/nature21386. [Epub ahead of print]


Cancer Genome Atlas Research Network. Integrated genomic characterization
of oesophageal carcinoma. Nature. 2017 Jan 12;541(7636):169-175. doi:
10.1038/nature20805. PubMed PMID: 28052061.


Yang L, Lee MS, Lu H, Oh DY, Kim YJ, Park D, Park G, Ren X, Bristow CA,
Haseley PS, Lee S, Pantazi A, Kucherlapati R, Park WY, Scott KL, Choi YL, Park
PJ. Analyzing Somatic Genome Rearrangements in Human Cancers by Using Whole-Exome
Sequencing. Am J Hum Genet. 2016 May 5;98(5):843-56.

Ceccarelli M, Barthel FP, Malta TM, Sabedot TS, Salama SR, Murray BA, Morozova
O, Newton Y, Radenbaugh A, Pagnotta SM, Anjum S, Wang J, Manyam G, Zoppoli P,
Ling S, Rao AA, Grifford M, Cherniack AD, Zhang H, Poisson L, Carlotti CG Jr,
Tirapelli DP, Rao A, Mikkelsen T, Lau CC, Yung WK, Rabadan R, Huse J, Brat DJ,
Lehman NL, Barnholtz-Sloan JS, Zheng S, Hess K, Rao G, Meyerson M, Beroukhim R,
Cooper L, Akbani R, Wrensch M, Haussler D, Aldape KD, Laird PW, Gutmann DH; TCGA
Research Network., Noushmehr H, Iavarone A, Verhaak RG. Molecular Profiling
Reveals Biologically Discrete Subsets and Pathways of Progression in Diffuse
Glioma. Cell. 2016 Jan 28;164(3):550-63. doi: 10.1016/j.cell.2015.12.028. PubMed
PMID: 26824661; PubMed Central PMCID: PMC4754110.


Cancer Genome Atlas Research Network. The Molecular Taxonomy of Primary
Prostate Cancer. Cell. 2015 Nov 5;163(4):1011-25.

Cancer Genome Atlas Network. Genomic Classification of Cutaneous Melanoma.
Cell. 2015 Jun 18;161(7):1681-96.

Cancer Genome Atlas Research Network, Brat DJ, Verhaak RG, et al. Comprehensive,
Integrative Genomic Analysis of Diffuse Lower-Grade Gliomas. N Engl J Med. 2015
Jun 25;372(26):2481-98.

Cancer Genome Atlas Network. Comprehensive genomic characterization of head
and neck squamous cell carcinomas. Nature. 2015 Jan 29;517(7536):576-82.

Cancer Genome Atlas Research Network. Integrated genomic characterization of
papillary thyroid carcinoma. Cell. 2014 Oct 23;159(3):676-90.

Parfenov M, Pedamallu CS, Gehlenborg N, Freeman SS, Danilova L, Bristow CA,
Lee S, Hadjipanayis AG, Ivanova EV, Wilkerson MD, Protopopov A, Yang L, Seth S,
Song X, Tang J, Ren X, Zhang J, Pantazi A, Santoso N, Xu AW, Mahadeshwar H,
Wheeler DA, Haddad RI, Jung J, Ojesina AI, Issaeva N, Yarbrough WG, Hayes DN,
Grandis JR, El-Naggar AK, Meyerson M, Park PJ, Chin L, Seidman JG, Hammerman PS,
Kucherlapati R; Cancer Genome Atlas Network.. Characterization of HPV and host
genome interactions in primary head and neck cancers. Proc Natl Acad Sci U S A.
2014 Oct 28;111(43):15544-9.

Davis CF, Ricketts CJ, Wang M, Yang L, Cherniack AD, Shen H, Buhay C, Kang H,
Kim SC, Fahey CC, Hacker KE, Bhanot G, Gordenin DA, Chu A, Gunaratne PH, Biehl M,
Seth S, Kaipparettu BA, Bristow CA, Donehower LA, Wallen EM, Smith AB, Tickoo SK,
Tamboli P, Reuter V, Schmidt LS, Hsieh JJ, Choueiri TK, Hakimi AA; Cancer Genome
Atlas Research Network., Chin L, Meyerson M, Kucherlapati R, Park WY, Robertson
AG, Laird PW, Henske EP, Kwiatkowski DJ, Park PJ, Morgan M, Shuch B, Muzny D,
Wheeler DA, Linehan WM, Gibbs RA, Rathmell WK, Creighton CJ. The somatic genomic
landscape of chromophobe renal cell carcinoma. Cancer Cell. 2014 Sep
8;26(3):319-30.

Hoadley KA, Yau C, Wolf DM, Cherniack AD, Tamborero D, Ng S, Leiserson MD,
Niu B, McLellan MD, Uzunangelov V, Zhang J, Kandoth C, Akbani R, Shen H, Omberg
L, Chu A, Margolin AA, Van't Veer LJ, Lopez-Bigas N, Laird PW, Raphael BJ, Ding
L, Robertson AG, Byers LA, Mills GB, Weinstein JN, Van Waes C, Chen Z, Collisson
EA; Cancer Genome Atlas Research Network., Benz CC, Perou CM, Stuart JM.
Multiplatform analysis of 12 cancer types reveals molecular classification within
and across tissues of origin. Cell. 2014 Aug 14;158(4):929-44.

Cancer Genome Atlas Research Network.. Comprehensive molecular profiling of
lung adenocarcinoma. Nature. 2014 Jul 31;511(7511):543-50.

Cancer Genome Atlas Research Network.. Comprehensive molecular
characterization of gastric adenocarcinoma. Nature. 2014 Sep 11;513(7517):202-9.


Cancer Genome Atlas Research Network.. Comprehensive molecular
characterization of urothelial bladder carcinoma. Nature. 2014 Mar
20;507(7492):315-22.

Cancer Genome Atlas Research Network., Weinstein JN, Collisson EA, Mills GB,
Shaw KR, Ozenberger BA, Ellrott K, Shmulevich I, Sander C, Stuart JM. The Cancer
Genome Atlas Pan-Cancer analysis project. Nat Genet. 2013 Oct;45(10):1113-20.


Pantazi A, Zovoilis A. Vector-free methods for manipulating miRNA activity in
vitro and in vivo. Methods Mol Biol. 2013;936:231-45.

Zovoilis A, Pantazi A, Smorag L, Opitz L, Riester GS, Wolf M, Zechner U,
Holubowska A, Stewart CL, Engel W. Embryonic stem cell-related miRNAs are
involved in differentiation of pluripotent cells originating from the germ line.
Mol Hum Reprod. 2010 Nov;16(11):793-803.

Zovoilis A, Smorag L, Pantazi A, Engel W. Members of the miR-290 cluster
modulate in vitro differentiation of mouse embryonic stem cells. Differentiation.
2009 Sep-Oct;78(2-3):69-78.